{ "_id": "6a1f1fddb401979e7342023f", "Package": "spinifex", "Title": "Manual Tours, Manual Control of Dynamic Projections of Numeric\nMultivariate Data", "Version": "0.3.10", "Authors@R": "c(\nperson(\"Nicholas\", \"Spyrison\", role = c(\"aut\", \"cre\"),\nemail = \"spyrison@gmail.com\",\ncomment = c(ORCID = \"https://orcid.org/0000-0002-8417-0212\")),\nperson(\"Dianne\", \"Cook\", role = c(\"aut\", \"ths\"),\ncomment = c(ORCID = \"https://orcid.org/0000-0002-3813-7155\"))\n)", "Description": "Data visualization tours animates linear projection of\nmultivariate data as its basis (ie. orientation) changes. The\n'spinifex' packages generates paths for manual tours by\nmanipulating the contribution of a single variable at a time\nCook & Buja (1997) . Other\ntypes of tours, such as grand (random walk) and guided\n(optimizing some objective function) are available in the\n'tourr' package Wickham et al. .\n'spinifex' builds on 'tourr' and can render tours with\n'gganimate' and 'plotly' graphics, and allows for exporting as\nan .html widget and as an .gif, respectively. This work is\nfully discussed in Spyrison & Cook (2020)\n.", "License": "MIT + file LICENSE", "URL": "https://github.com/nspyrison/spinifex/", "BugReports": "https://github.com/nspyrison/spinifex/issues", "VignetteBuilder": "knitr", "Encoding": "UTF-8", "LazyData": "true", "Roxygen": "list(markdown = TRUE, roclets=c('rd', 'collate', 'namespace'))", "RoxygenNote": "7.3.2", "Language": "en-US", "Config/testthat/edition": "3", "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nlibglpk-dev libgmp3-dev make libgsl0-dev libicu-dev libuv1-dev\nlibxml2-dev libssl-dev pkg-config libproj-dev libsqlite3-dev\nlibudunits2-dev zlib1g-dev libclang-dev", "Repository": "https://nspyrison.r-universe.dev", "Date/Publication": "2025-09-17 21:37:37 UTC", "RemoteUrl": "https://github.com/nspyrison/spinifex", "RemoteRef": "HEAD", "RemoteSha": "0ffca7e65ffbff0cc68b13147bf497e14c9294a7", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-16 08:03:21 UTC", "User": "root" }, "Author": "Nicholas Spyrison [aut, cre] (ORCID:\n),\nDianne Cook [aut, ths] (ORCID: )", "Maintainer": "Nicholas Spyrison ", "MD5sum": "1862b511e3a88e40dfe23693815ddd6b", "_user": "nspyrison", "_type": "src", "_file": "spinifex_0.3.10.tar.gz", "_fileid": "dcef87f11125a82483e84519ae21db86360254394d84a24fb2f860251b72958d", "_filesize": 3649390, "_sha256": "dcef87f11125a82483e84519ae21db86360254394d84a24fb2f860251b72958d", "_created": "2026-05-16T08:03:21.000Z", "_published": "2026-06-02T18:24:29.970Z", "_distro": "noble", "_jobs": [ { "job": 79142361386, "time": 264, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7031831932" }, { "job": 79142361377, "time": 244, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7031829711" }, { "job": 79142361444, "time": 182, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7031835738" }, { "job": 79142361506, "time": 185, "config": "macos-release-arm64", "r": "4.6.0", "check": 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wine dataset from the UCI Machine Learning Repository.", "object": "wine", "class": [ "data.frame" ], "fields": [ "Type", "Alcohol", "Malic", "Ash", "Alcalinity", "Magnesium", "Phenols", "Flavanoids", "Nonflavanoids", "Proanthocyanins", "Color", "Hue", "Dilution", "Proline" ], "rows": 178, "table": true, "tojson": true } ], "_help": [ { "page": "dot-bind_elements2df", "title": "Binds replicated elements of a list as columns of a data frame.", "concept": [ "Internal utility" ], "topics": [ ".bind_elements2df" ] }, { "page": "dot-init4proto", "title": "Initialize common obj from .global 'ggtour()' objects & test their existence", "concept": [ "Internal utility" ], "topics": [ ".init4proto" ] }, { "page": "dot-lapply_rep_len", "title": "Replicate all vector elements of a list", "concept": [ "Internal utility" ], "topics": [ ".lapply_rep_len" ] }, { "page": "animate_gganimate", "title": "Animate a ggtour as a .gif via '{gganimate}'", "concept": [ "ggtour animator" ], "topics": [ "animate_gganimate" ] }, { "page": "animate_plotly", "title": "Animate a ggtour as and HTML widget via '{plotly}'", "concept": [ "ggtour animator" ], "topics": [ "animate_plotly" ] }, { "page": "append_fixed_y", "title": "Append a fixed vertical height", "concept": [ "ggtour proto functions" ], "topics": [ "append_fixed_y" ] }, { "page": "array2df", "title": "Turns a tour path array into a long data frame.", "topics": [ "array2df" ] }, { "page": "basis_guided", "title": "Solve for the last basis of a guided tour.", "concept": [ "basis producing functions" ], "topics": [ "basis_guided" ] }, { "page": "basis_half_circle", "title": "Create a basis that gives uniform contribution in a circle", "concept": [ "basis producing functions" ], "topics": [ "basis_half_circle" ] }, { "page": "basis_odp", "title": "The basis of Orthogonal Discriminant Projection (ODP)", "concept": [ "basis producing functions" ], "topics": [ "basis_odp" ] }, { "page": "basis_olda", "title": "The basis of Orthogonal Linear Discriminant Analysis (OLDA)", "concept": [ "basis producing functions" ], "topics": [ "basis_olda" ] }, { "page": "basis_onpp", "title": "The basis of Orthogonal Neighborhood Preserving Projection (ONPP)", "concept": [ "basis producing functions" ], "topics": [ "basis_onpp" ] }, { "page": "basis_pca", "title": "The basis of Principal Component Analysis (PCA)", "concept": [ "basis producing functions" ], "topics": [ "basis_pca" ] }, { "page": "BreastCancer_na.rm", "title": "Wisconsin Breast Cancer Database", "topics": [ "BreastCancer_na.rm" ] }, { "page": "create_manip_space", "title": "Create a manipulation space to rotate the manipulation variable in.", "concept": [ "manual tour adjacent functions" ], "topics": [ "create_manip_space" ] }, { "page": "devMessage", "title": "Development message", "topics": [ "devMessage" ] }, { "page": "draw_basis", "title": "Draw a basis on a static ggplot", "topics": [ "draw_basis" ] }, { "page": "facet_wrap_tour", "title": "Wrap a 1d ribbon of panels into 2d for animation", "concept": [ "ggtour proto functions" ], "topics": [ "facet_wrap_tour" ] }, { "page": "filmstrip", "title": "Create a \"filmstrip\" of the frames of a ggtour.", "concept": [ "ggtour animator" ], "topics": [ "filmstrip" ] }, { "page": "ggtour", "title": "Prepare a new grammar of graphics tour", "concept": [ "ggtour proto functions" ], "topics": [ "ggtour" ] }, { "page": "ide", "title": "Intrinsic dimension estimation (ide).", "topics": [ "ide" ] }, { "page": "interpolate_manual_tour", "title": "Interpolates a manual tour", "concept": [ "manual tour adjacent functions" ], "topics": [ "interpolate_manual_tour" ] }, { "page": "is_any_layer_class", "title": "Check ggplot layers for use of a specific geom", "topics": [ "is_any_layer_class" ] }, { "page": "is_orthonormal", "title": "Orthonormality of a matrix", "topics": [ "is_orthonormal" ] }, { "page": "manip_var_of", "title": "Suggest a manipulation variable.", "concept": [ "manual tour adjacent functions" ], "topics": [ "manip_var_of" ] }, { "page": "manual_tour", "title": "Produce the series of projection bases to rotate a variable into and out of a projection.", "concept": [ "manual tour adjacent functions" ], "topics": [ "manual_tour" ] }, { "page": "map_absolute", "title": "Manually offset and scale the first 2 columns of a matrix or data.frame.", "concept": [ "linear mapping functions" ], "topics": [ "map_absolute" ] }, { "page": "map_relative", "title": "Returns the axis scale and position.", "concept": [ "linear mapping functions" ], "topics": [ "map_relative" ] }, { "page": "penguins_na.rm", "title": "Size measurements for adult foraging penguins near Palmer Station, Antarctica", "topics": [ "penguins_na.rm" ] }, { "page": "PimaIndiansDiabetes_long", "title": "Pima Indians Diabetes Dataset, long", "topics": [ "PimaIndiansDiabetes_long" ] }, { "page": "PimaIndiansDiabetes_wide", "title": "Pima Indians Diabetes Dataset, wide", "topics": [ "PimaIndiansDiabetes_wide" ] }, { "page": "play_manual_tour", "title": "Animate a manual tour. superseded", "topics": [ "play_manual_tour" ] }, { "page": "play_tour_path", "title": "Animates the provided tour path.", "topics": [ "play_tour_path" ] }, { "page": "plot_pca", "title": "Plot 2 components of Principal Component Analysis", "topics": [ "plot_pca" ] }, { "page": "plot_pca_scree", "title": "Plot 2 components of Principal Component Analysis", "topics": [ "plot_pca_scree" ] }, { "page": "proto_basis", "title": "Tour proto for a 2D and 1D basis axes respectively", "concept": [ "ggtour proto functions" ], "topics": [ "proto_basis", "proto_basis1d" ] }, { "page": "proto_default", "title": "Wrapper function for default 2D/1D tours respectively.", "concept": [ "ggtour proto functions" ], "topics": [ "proto_def", "proto_def1d", "proto_def2d", "proto_default", "proto_default1d", "proto_default2d" ] }, { "page": "proto_density", "title": "Tour proto for data, 1D density, with rug marks", "concept": [ "ggtour proto functions" ], "topics": [ "proto_density", "proto_density1d" ] }, { "page": "proto_density2d", "title": "Tour proto for data, 1D density, with rug marks", "concept": [ "ggtour proto functions" ], "topics": [ "proto_density2d" ] }, { "page": "proto_frame_cor2", "title": "Tour proto for frames square correlation", "topics": [ "proto_frame_cor2" ] }, { "page": "proto_hex", "title": "Tour proto for data, hexagonal heatmap", "concept": [ "ggtour proto functions" ], "topics": [ "proto_hex" ] }, { "page": "proto_highlight", "title": "Tour proto highlighing specified points", "concept": [ "ggtour proto functions" ], "topics": [ "proto_highlight", "proto_highlight1d", "proto_highlight_2d" ] }, { "page": "proto_hline0", "title": "Tour proto adding a vertical/horizontal line", "concept": [ "ggtour proto functions" ], "topics": [ "proto_hline", "proto_hline0", "proto_vline", "proto_vline0" ] }, { "page": "proto_origin", "title": "Tour proto for data origin zero mark", "concept": [ "ggtour proto functions" ], "topics": [ "proto_origin", "proto_origin1d", "proto_origin2d" ] }, { "page": "proto_point", "title": "Tour proto for data point", "concept": [ "ggtour proto functions" ], "topics": [ "proto_point", "proto_points" ] }, { "page": "proto_text", "title": "Tour proto for data, text labels", "concept": [ "ggtour proto functions" ], "topics": [ "proto_text" ] }, { "page": "proto_text_repel", "title": "Tour proto for data, text labels that repel", "concept": [ "ggtour proto functions" ], "topics": [ "proto_text_repel" ] }, { "page": "render_", "title": "Prepare the ggplot object before passing to either animation package.", "topics": [ "render_" ] }, { "page": "render_gganimate", "title": "Render the frames as a _gganimate_ animation.", "topics": [ "render_gganimate" ] }, { "page": "render_plotly", "title": "Animation the frames as a HTML widget.", "topics": [ "render_plotly" ] }, { "page": "rotate_manip_space", "title": "Performs a rotation on the manipulation space of the given manip var.", "concept": [ "manual tour adjacent functions" ], "topics": [ "rotate_manip_space" ] }, { "page": "run_app", "title": "Runs a shiny app demonstrating manual tours", "topics": [ "run_app" ] }, { "page": "save_history", "title": "Save a tour basis array.", "topics": [ "save_history" ] }, { "page": "scale_colour_discrete", "title": "Set default color & fill for discrete variables", "topics": [ "scale_colour_discrete", "scale_fill_discrete" ] }, { "page": "scale_sd", "title": "Preprocess numeric variables", "topics": [ "scale_01", "scale_sd" ] }, { "page": "spinifex", "title": "spinifex", "topics": [ "spinifex-package", "spinifex" ] }, { "page": "theme_spinifex", "title": "Theme spinifex", "topics": [ "theme_spinifex" ] }, { "page": "view_frame", "title": "Plot a single frame of a manual tour.", "topics": [ "view_frame" ] }, { "page": "view_manip_space", "title": "Plot 2D projection frame and return the axes table.", "topics": [ "view_manip_space" ] }, { "page": "weather", "title": "Sample dataset of daily weather observations from Canberra airport in Australia.", "topics": [ "weather", "weather_na.rm" ] }, { "page": "wine", "title": "The wine dataset from the UCI Machine Learning Repository.", "topics": [ "wine" ] } ], "_readme": "https://github.com/nspyrison/spinifex/raw/HEAD/README.md", "_rundeps": [ "ADMM", "alphahull", "ash", "askpass", "backports", "base64enc", "bitops", "boot", "bslib", "cachem", "cassowaryr", "checkmate", "clarabel", "class", "classInt", "cli", "cluster", "codetools", "commonmark", "cpp11", "crayon", "crosstalk", "curl", "CVXR", "data.table", "DBI", "dbscan", "deldir", "digest", "doParallel", "dplyr", "e1071", "energy", "evaluate", "farver", "fastcluster", "fastmap", "fontawesome", "foreach", "fs", "generics", "geozoo", "gganimate", "ggplot2", "glue", "gmp", "gsignal", "gsl", "gtable", "highr", "highs", "hms", "htmltools", "htmlwidgets", "httpuv", "httr", "igraph", "interp", "isoband", "iterators", "jquerylib", "jsonlite", "KernSmooth", "knitr", 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